Best Medical Accounting Software

Medical Accounting Software is a specialized solution designed to streamline the financial processes of healthcare practices. It simplifies the management of billing, invoicing, payroll, and insurance claims, reducing the time and effort spent on administrative tasks. With automated calculations and real-time reporting, this software helps ensure accuracy and compliance with healthcare regulations. For medical practices looking to improve financial management, Medical Accounting Systems offer advanced features like automated payment reminders, tax calculations, and detailed financial reports. By integrating with electronic health record (EHR) systems, it allows for seamless data sharing, improving both operational efficiency and patient care. Additionally, it helps businesses monitor cash flow, manage accounts receivable, and ensure timely payments, reducing financial errors and delays. Check out our list of the Best Medical Accounting Software to find the ideal system for your healthcare practice, designed to streamline your financial operations and improve your bottom line.

Last Updated: September 03, 2025

84 Software

List of Top Medical Accounting Software | Best Medical Accounting Systems

Pricing Options

Monthly Subscription

Annual Subscription

One-Time Payment

Quote Based

Features

Medical Billing

Claims Management

Invoice Management

Financial Reporting

HIPAA Compliant

Data Integration

Expense Management

Materials Management

Medical Coding

Cash Management

Payment Processing

Purchasing & Receiving

Fixed Asset Management

Approval Process Control

Budgeting/Forecasting

Tax Management

Financial Analysis

Artificial Intelligence

Company Size

Self Employed

Small Business

Medium Business

Enterprise

I'm looking for Medical Accounting Software that is:

Cloud Accounting Software for Growing Businesses

Striven is an exceptional business management software. It’s a comprehensive platform that provides efficient and accurate business solutions all over the world. Striven offers top-notch solutions to fulfill core business requirements like Accounting, Sales Management, CRM, Inventory Management, and Human Resources Management. Companies, regardless of their size, can use Striven to get more tran... Read more about Striven

Free Trial

7 Days

Pricing Type

$35 Per month

Location

United States

GST-ready accounting app/software for Android, iOS and Windows

BookKeeper is a cool accounting software developed for ease of use in managing financial processes. The tool simplifies operations like recording transactions and managing expenses with a user-friendly interface. The software is suitable for individuals and businesses, offering a practical solution for financial organizations. BookKeeper supports invoicing to assist in efficient billing processes.... Read more about Book Keeper

Free Trial

14 Days

Pricing Type

$70 Per year

Location

British Indian Ocean Territory

New Zealand's Smartest Accounting Software

CashManager is a gold-level accounting system created for small businesses. Its straightforward interface makes it easy for users, even those without extensive accounting knowledge, to manage their finances effectively. With features like invoicing, expense tracking, and bank reconciliation, CashManager simplifies day-to-day financial tasks. The software operates on both desktop and cloud platform... Read more about CashManager

Free Trial

NA

Pricing Type

Contact Vendor

Location

United States

Powerful, Data-driven ERP and Accounting Solutions for Small to Medium Sized Businesses.

Multiview ERP is a versatile software solution designed to streamline enterprise resource planning across diverse industries. Its strength lies in its comprehensive suite of modules, covering financial management, inventory, procurement, and project accounting. Multiview ERP stands out with its robust reporting and analytics tools, enabling businesses to gain deep insights into their operations. T... Read more about Multiview ERP

Free Trial

NA

Pricing Type

Contact Vendor

Location

Canada

FastFund Software Suite is an all-in-one accounting solution tailored for nonprofit organizations. It offers comprehensive tools for financial management, budgeting, and reporting, ensuring that nonprofits can maintain transparency and compliance with regulations. With features like donor management, grant tracking, and fund accounting, FastFund simplifies the financial processes unique to the non... Read more about FastFund Software Suite

Free Trial

Available

Pricing Type

$42 Per month

Location

United States

SapphireOne is an advanced accounting software solution designed to provide comprehensive financial management for businesses of all sizes. This all-in-one platform integrates accounting, inventory management, and customer relationship management (CRM) functionalities, ensuring seamless operations across various departments. With its user-friendly interface, SapphireOne allows users to manage fina... Read more about SapphireOne

Free Trial

Available

Pricing Type

Contact Vendor

Location

Australia

ActivityHD is a robust accounting software solution designed to meet the unique needs of service-based businesses. With its comprehensive suite of features, ActivityHD streamlines financial management, including invoicing, expense tracking, and financial reporting. The platform's user-friendly interface allows businesses to monitor their financial performance in real time, ensuring accurate record... Read more about ActivityHD

Free Trial

NA

Pricing Type

$500 Per user

Location

United States

The GMS Accounting and Financial Management Reporting System is designed to manage grants and financial reporting for non-profit organizations and public agencies. It provides tools for budgeting, grant tracking, financial reporting, and compliance management. The platform integrates seamlessly with payroll and other accounting systems, ensuring accurate tracking of grant funds and expenditures. K... Read more about GMS Accounting and Financial Management Reporting System

Free Trial

NA

Pricing Type

$3500 Per one-time

Location

United States

R4 Enterprise is a comprehensive enterprise resource planning (ERP) software designed to integrate and streamline core business processes across various industries. The platform provides tools for finance, inventory management, human resources, and supply chain management, enabling organizations to optimize their operations. With its modular architecture, R4 Enterprise allows businesses to customi... Read more about R4 Enterprise

Free Trial

NA

Pricing Type

Contact Vendor

Location

United States

E-Sign is a specialized digital signature software designed to facilitate secure and efficient electronic signing of documents. The platform offers comprehensive tools for document management, including template creation, signature tracking, and compliance verification. With a user-friendly interface, users can easily send documents for signature, monitor signing progress in real-time, and ensure ... Read more about E-Sign

Free Trial

Available

Pricing Type

$10 Per user

Location

United Kingdom

True Sky is an advanced budgeting software designed to help organizations streamline their financial planning and analysis processes. This platform provides comprehensive tools for budgeting, forecasting, and reporting, ensuring that users can optimize their financial management. With features for collaboration, real-time data integration, and scenario modeling, True Sky enhances decision-making c... Read more about True Sky

Free Trial

NA

Pricing Type

Contact Vendor

Location

Canada

Xledger is a cloud-based accounting software designed to help businesses manage their financial operations efficiently. It offers a comprehensive suite of features, including accounts payable and receivable, financial reporting, budgeting, and cash flow management. Xledger’s automation tools streamline key accounting tasks, such as invoicing, bank reconciliation, and expense tracking, reducing t... Read more about Xledger

Free Trial

NA

Pricing Type

$750 Per month

Location

United States

SBS Financials is a comprehensive accounting software designed to streamline and enhance financial management for businesses of all sizes. It offers a centralized platform for handling essential accounting tasks including bookkeeping, invoicing, payroll, expense tracking, and financial reporting, ensuring accuracy and efficiency in financial operations. SBS Financials' intuitive interface allows u... Read more about SBS Financials

Free Trial

NA

Pricing Type

Contact Vendor

Location

United States

bluQube is a versatile Accounting Software designed to simplify and streamline financial management for businesses of all sizes. It offers a comprehensive platform for managing invoices, tracking expenses, reconciling bank statements, and generating detailed financial reports with ease. bluQube features an intuitive interface that allows users to input and categorize transactions, automate recurri... Read more about bluQube

Free Trial

NA

Pricing Type

Contact Vendor

Location

United Kingdom

NextProcess is a comprehensive document management software designed to help businesses streamline the storage, organization, and retrieval of important documents. The platform provides a secure, centralized repository where users can store digital files, track version history, and manage access controls. NextProcess offers advanced search functionality, making it easy to find documents quickly us... Read more about NextProcess

Free Trial

Available

Pricing Type

Contact Vendor

Location

United States

ALTO Accounts Payable is a powerful accounts payable software designed to streamline the management of invoices, payments, and vendor relationships. The platform automates key processes such as invoice approvals, payment processing, and reconciliation, reducing manual workload and minimizing errors. ALTO Accounts Payable offers tools for tracking payment statuses, managing cash flow, and generatin... Read more about ALTO Accounts Payable

Free Trial

Available

Pricing Type

Contact Vendor

Location

Canada

Versa Cloud ERP is a comprehensive distribution software designed to help businesses manage their supply chain, inventory, and order fulfillment processes efficiently. The platform provides tools for inventory tracking, demand forecasting, and procurement management, ensuring that businesses can optimize their operations and reduce costs. Versa Cloud ERP’s real-time analytics offer insights into... Read more about Versa Cloud ERP

Free Trial

NA

Pricing Type

$0 Per month

Location

United States

HostBooks Accounting Software is a comprehensive accounting solution designed to meet the financial management needs of businesses of all sizes. It offers a wide range of tools for bookkeeping, invoicing, expense tracking, payroll management, and financial reporting, ensuring accurate and efficient financial operations. HostBooks features an intuitive user interface that simplifies complex account... Read more about HostBooks Accounting Software

Free Trial

Available

Pricing Type

$9.99 Per month

Location

United States

Focus X is a comprehensive accounting software tailored to meet the needs of small to medium-sized businesses seeking efficient financial management solutions. This robust platform offers a wide array of features, including invoicing, expense tracking, payroll management, and financial reporting, ensuring that all aspects of a business’s finances are seamlessly integrated and easily accessible. ... Read more about Focus X

Free Trial

NA

Pricing Type

Contact Vendor

Location

United States

Billed is a comprehensive accounting software designed to simplify financial management for businesses of all sizes. This platform provides an array of features, including invoicing, expense tracking, financial reporting, and tax preparation, all within a user-friendly interface. With Billed, users can automate billing processes, ensuring timely invoicing and reducing the risk of errors. The softw... Read more about Billed

Free Trial

Available

Pricing Type

$10 Per month

Location

United States

RapidAP is an advanced accounts payable software that streamlines the invoice management process for organizations of all sizes. This platform automates the entire accounts payable workflow, from invoice receipt to payment processing, significantly reducing manual tasks and improving accuracy. With RapidAP, users can capture and process invoices electronically, enabling faster approvals and minimi... Read more about RapidAP

Free Trial

NA

Pricing Type

Contact Vendor

Location

Australia

Telco Billing Solution is a specialized billing and invoicing software designed for telecommunications companies and service providers. This platform provides comprehensive tools for managing customer accounts, processing payments, and generating invoices accurately and efficiently. With Telco Billing Solution, users can automate billing processes, ensuring that invoices are sent promptly and paym... Read more about Telco Billing Solution

Free Trial

NA

Pricing Type

Contact Vendor

Location

Pakistan

Clinic to Cloud is an all-in-one cloud-based medical practice management software designed to simplify healthcare administration and improve patient care. This platform offers a comprehensive suite of tools for appointment scheduling, electronic health records (EHR), billing, and patient communication. Clinic to Cloud allows healthcare providers to manage patient data securely in real time, ensuri... Read more about Clinic to Cloud

Free Trial

NA

Pricing Type

Contact Vendor

Location

Australia

GipoNext is a comprehensive patient case management software tailored for healthcare professionals to better manage patient information and treatment plans. It allows healthcare providers to track patient histories, monitor progress, and maintain detailed records all in one easy-to-use platform. The software ensures that medical teams can quickly access patient data, such as diagnoses, treatment r... Read more about GipoNext

Free Trial

Available

Pricing Type

Contact Vendor

Location

Italy

Intelligent Payment Portal is a sophisticated accounts receivable software that streamlines payment processing and enhances financial efficiency for businesses of all sizes. This platform simplifies the invoicing process by automating billing, payment reminders, and transaction tracking. Businesses can easily send invoices to customers, track their payment status in real-time, and offer multiple p... Read more about Intelligent Payment Portal

Free Trial

NA

Pricing Type

Contact Vendor

Location

United States

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Frequently Asked Questions

Medical Accounting Software helps healthcare providers manage their financial operations, including billing, invoicing, insurance claims, expense tracking, payroll, and revenue reporting—tailored specifically for medical practices, clinics, and hospitals.

It ensures accurate financial records, streamlines patient billing, improves cash flow management, handles complex insurance processes, and supports regulatory compliance with healthcare-specific accounting standards.

Key features include medical billing integration, insurance claim management, patient invoicing, payment posting, revenue cycle management, financial reporting, and compliance tracking (like HIPAA and healthcare financial regulations).

Look for healthcare-specific accounting features, secure patient data handling, easy integration with practice management systems and EMRs, automated claim processing, and detailed financial analytics.

It automates billing and collections, reduces claim denials, provides real-time financial visibility, ensures faster reimbursements, and helps healthcare providers maximize revenue.

Consider your practice size, volume of billing transactions, insurance claim complexity, integration needs with your EMR system, and whether you require multi-location or specialty-specific support.

Small practices use it to manage patient invoices, simplify insurance claims, track expenses, and generate financial reports—allowing physicians to focus more on patient care.

Private medical practices, hospitals, specialty clinics, outpatient centers, dental and orthodontic offices, therapy clinics, urgent care centers, and healthcare groups benefit the most from using Medical Accounting Software for streamlined financial operations.

Multi-specialty clinics handle complex billing across different departments. Medical Accounting Software consolidates these processes, making it easier to manage diverse services, track departmental income, and handle insurance reimbursements efficiently.

It increases billing accuracy, reduces claim denials, speeds up cash flow, improves financial transparency, enhances patient trust with clear invoicing, and supports scalable healthcare operations.